Factory Calibration (firmware 2.0)

In the following instructions, commands that need to be done on the Beta are prefixed with

  [operator@beta] ~ command

... while commands that need to be done on your computer are prefixed with

  $ command

1 Notice

This page is for firmware 2.0. For firmware 1.0, check this page Factory Calibration.

This page is assuming you have installed firmware 2.0 on a microSD card of at least 16GB, in order to capture darkframes on the Beta directly.

Hint : create a variable containing your Betas IP for easy access, for example :

$ export BETA=192.168.1.101

If your startup script doesn't do it already, don't forget to perfom axiom_start.sh

  [operator@beta] ~ sudo axiom_start.sh

TO DO

Good practice is to add a "blank snap" when changing exposure timing, ie

  [operator@beta] ~ axiom_snap  -2 -b -r -e 10ms -z && axiom_snap -2 -b -r -e 10ms > test3.raw12

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2 Preparations

Install on your AXIOM Beta:

[operator@beta] pacman -S python-numpy

Install the dcraw and octave packages on your PC. For Ubuntu this would look like:

$ sudo apt-get install dcraw octave

Download and compile raw2dng on your PC: https://github.com/apertus-open-source-cinema/misc-tools-utilities/tree/master/raw2dng

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3 Check range of the input signal

On the Beta set gain to x1 by running:

[operator@beta] ~ sudo /usr/axiom/script/axiom_set_gain.sh 1

Download this Octave file to your PC into your current work directory:

$ wget https://raw.githubusercontent.com/apertus-open-source-cinema/misc-tools-utilities/master/darkframes/read_raw.m

Capture an overexposed image with the Beta and check the levels:

$ ssh operator@$BETA "axiom_snap -2 -b -r -e 100ms" > snap.raw12 

$ ./raw2dng snap.raw12 --totally-raw

$ octave

   octave:1> a = read_raw('snap.DNG')

   octave:2> prctile(a(:), [0.1 1 50 99 99.9])

If everything worked you will get a wall of numbers now. TODO: We should extract the essential pieces of information here... (min/max maybe)?

Lower numbers should be around 50...300 (certainly not zero). Higher numbers should be around 4000, but not 4095.

Repeat for gains 2, 3, 4.

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4 RCN calibration

RCN stands for Row Coloumn Noise correction meaning we filter out the fixed pattern noise.

Clear the old RCN values, by typing on the Beta :

sudo axiom_start.sh
sudo /usr/axiom/script/axiom_rcn_clear.py

Now you need to make sure that your Beta is not capturing any light (really not a single photon should hit the sensor :) ):

1. close the lens aperture as far as possible
2. attach lens cap
3. put black lens bag over Beta
4. turn off all lights in the room - do this at night or in a completely dark room

Take 64 dark frames at 10ms (~1.2GB), gain x1 with the following script executed on the Beta:

sudo /usr/axiom/script/axiom_set_gain.sh 1

. ./cmv.func; fil_reg 15 0 # disable HDMI stream 

for i in `seq 1 64`; do 

  axiom_snap -2 -b -r -e 10ms > dark-x1-10ms-$i.raw12  

done  

. ./cmv.func; fil_reg 15 0x01000100  # enable HDMI stream

Compute a temporary dark frame for RCN calibration:

raw2dng --no-blackcol --calc-darkframe dark-x1-10ms-*.raw12

This should process quite quickly and output something like the following at the end:

Averaged 64 frames exposed from 12.00 to 12.00 ms. 

Could not compute dark current. 

Please use different exposures, e.g. from 1 to 50 ms. 

Dark offset : 0.00 

Writing darkframe-x1.pgm... 

Done.

Rename and upload darkframe to your Beta:

mv darkframe-x1.pgm darkframe-rcn.pgm

Set the RCN values:

sudo /usr/axiom/script/axiom_rcn_darkframe.py darkframe-rcn.pgm

Put this in startup script (ie : axiom_start.sh) :

/usr/axiom/script/axiom_rcn_darkframe.py darkframe-rcn.pgm

4.1 Troubleshooting

If you get an error report like this:

Traceback (most recent call last): 

 File "rcn_darkframe.py", line 17, in <module> 

   import png 

ImportError: No module named 'png'

Make sure the Beta is connected to the Internet (via Ethernet) and run:

pip install pypng

and then run the python script again

If you got something like this :

Traceback (most recent call last): 

  File "/usr/axiom/script/axiom_rcn_darkframe.py", line 75, in <module> 

    dark = read_pnm(filename) 

  File "/usr/axiom/script/axiom_rcn_darkframe.py", line 53, in read_pnm 

    format, width, height, samples, maxval = png.read_pnm_header( fd ) 

AttributeError: module 'png' has no attribute 'read_pnm_header' 

Make sure the Beta is connected to the Internet (via Ethernet) and run:

sudo pip install --force "pypng==0.0.18"

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5 RCN validation

5.1 Method 1 : on the Beta

On the Beta, capture one darkframe without compensations:

[operator@beta] $ sudo /usr/axiom/script/axiom_rcn_clear.py  

[operator@beta] $ axiom_snap  -2 -b -r -e 10ms > dark-check-1.raw12

Capture one darkframe with compensations:

[operator@beta] $ sudo /usr/axiom/script/axiom_rcn_darkframe.py darkframe-rcn.pgm 

[operator@beta] $ axiom_snap  -2 -b -r -e 10ms > dark-check-2.raw12

Then use raw2dng to analyze the differences:

[operator@beta] $ raw2dng --no-darkframe --check-darkframe dark-check-1.raw12 

[operator@beta] $ raw2dng --no-darkframe --check-darkframe dark-check-2.raw12

With the compensated snapshot the column noise should disappear, and only row noise left should be dynamic (not static). Visual inspection: the dark frame should have only horizontal lines, not vertical ones.

Sample output:

Average     : 127.36               # about 128, OK 

Pixel noise : 5.44                 # this one is a bit high because we only corrected row and column offsets (it's OK) 

Row noise   : 2.30 (42.2%)         # this one should be only dynamic row noise - see Method 3 below. 

Col noise   : 0.20 (3.8%)          # this one is very small, that's what we need to check here

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5.2 Method 2 : visual method

Put a lens cap on the camera and check the image on a HDMI monitor.

In the camera set the matrix gains to:

[operator@beta] $ sudo /usr/axiom/script/axiom_mat4_conf.sh  20 0 0 0  0 10 10 0  0 10 10 0  0 0 0 10  0 0 0 0

run:

[operator@beta] $ sudo /usr/axiom/script/axiom/rcn_clear.py

The static noise profile should be visible.

Being in the folder where the darkframe-rcn.pgm file is (should be ~), run:

[operator@beta] $ sudo /usr/axiom/script/axiom/rcn_darkframe.py darkframe-rcn.pgm 

The static noise profile should be gone. You will still see dynamic row noise (horizontal lines flickering) - thats expected.

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5.3 Method 3 : with octave

Capture 2 frames:

ssh operator@$BETA "axiom_snap -2 -b -r -e 10ms" > dark-check-1.raw12  

ssh operator@$BETA "axiom_snap -2 -b -r -e 10ms" > dark-check-2.raw12 

Convert the two darkframes with raw2dng:

raw2dng dark-check-*

Make sure you have the required octave function file in place:

wget https://raw.githubusercontent.com/apertus-open-source-cinema/misc-tools-utilities/master/darkframes/read_raw.m

Also you need to install the octave "signal" and "control" packages from: http://octave.sourceforge.net/packages.php then inside octave run to install:

pkg install package_name 

To check whether the entire row noise is dynamic, load the two raw images in octave and check the autocorrelation between the two row noise samples:

pkg load signal 

a = read_raw('dark-check-1.DNG'); 

b = read_raw('dark-check-2.DNG'); 

ra = mean(a'); ra = ra - mean(ra); 

rb = mean(b'); rb = rb - mean(rb); 

xcov(ra, rb, 0, 'coeff')

Result should be very small (about 0.1 or lower). When running this check on two uncalibrated dark frames, you will get around 0.8 - 0.9.

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6 Step 3: Dark frame calibration

This step significantly improves image noise levels. More info here and there. Make sure the RCN calibration from previous steps is in place before continueing here.

Take 400 dark frames at various exposure times for the 4 gains, and compute darkframes for each gain. This will require around 8GB of disk space.

Script to do it remotely :

for g in 1 2 3 4;  do 

  ssh operator@$BETA sudo /usr/axiom/script/axiom_set_gain.sh ${g} 

  for t in {1..100}; do

    for i in {1..4};  do 

      ssh operator@$BETA "axiom_snap -2 -r -e ${i}ms" > dark-x${g}-${t}ms-v${i}.raw12 

    done 

  done 

  raw2dng --calc-dcnuframe dark-x$g-*.raw12 

  rm *.raw12 

done

Script to do it on the Beta directly :

for g in 1 2 3 4;  do 

  sudo /usr/axiom/script/axiom_set_gain.sh ${g} 

  for t in {1..100}; do

    for i in {1..4};  do 

      axiom_snap -2 -r -e ${i}ms > dark-x${g}-${t}ms-v${i}.raw12 

    done 

  done 

  raw2dng --calc-dcnuframe dark-x$g-*.raw12 

  rm *.raw12 

 done

This produces the following files:

darkframe-x1.pgm, dcnuframe-x1.pgm, darkframe-x2.pgm, dcnuframe-x2.pgm, darkframe-x3.pgm, dcnuframe-x3.pgm, darkframe-x4.pgm, dcnuframe-x4.pgm

Store these files in a save place as they will be used in post-processing.

Place them in the directory where you capture raw12 files or experimental raw HDMI recordings, so raw2dng will use them.

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7 Dark Frame Validation

Capture a few new raw12 darkframes with rcn enabled and PGMs in place for raw2dng.

raw2dng --check-darkframe dark*.raw12 > dark-check.log

If the calibration worked you should get lower noise values as in step 2.

average value: close to 128

pixel noise: about 3 or 4 (may increase at longer exposure times)

row noise and column noise should look similar to this:

Pixel noise : 3     
          
Row noise   : 1.70  
   
Col noise   : 0.15

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8 Color profiling

Set gain x1.

ssh root@$BETA "./set_gain.sh 1"

Take a picture of the IT8 chart, correctly exposed.

Edit the coordinates and the raw file name in calib_argyll.sh.

ssh root@$BETA "./cmv_snap3 -2 -b -r -e 10ms" > it8chart.raw12
./calib_argyll.sh IT8

Save the following files:

• ICC profile (*.icc)
• OCIO configuration (copy/paste from terminal) + LUT file (*.spi1d)

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9 Color profiling validation

Render the IT8 chart in Blender, using the OCIO configuration.

Same with the ICC profile (Adobe? RawTherapee? What apps support ICC?)

(todo: detailed steps)

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10 Step 5: HDMI dark frames

For experimental 4k raw recording (https://www.apertus.org/axiom-beta-uhd-raw-mode-explained-article-may-2016) step 3 calibration is not required (step 2 should be in place though). Instead darkframes are collected from HDMI recordings.

Record a 1-minute clip with lens cap on.

Average odd and even frames.

(todo: polish and upload the averaging script)

(todo: check if the HDMI dark frames can be computed from regular dark frames)

Results: darkframe-hdmi-A.ppm and darkframe-hdmi-B.ppm.

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11 Step 6: HDMI filters for raw recovery

This calibration is for to the recorder, not for the camera. It's for recovering the original raw data from the HDMI, so it has nothing to do with sensor profiling and such.

Record some scene with high detail AND rich colors.

Take a raw12 snapshot in the middle of recording. The HDMI stream will pause for a few seconds.

Upload two frames from the paused clip, together with the raw12 file. This calibration will be hardcoded in hdmi4k.

The two frames must be in the native format of your video recorder (not DNG). You should be able to cut the video with ffmpeg -vcodec copy.

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12 TODO

• batch script to copy all the utilities for the workflow
• implement this: https://wiki.apertus.org/index.php/Calibration_files
• automate HDMI calibration